To evaluate the significance of alterations in DNA methylation during human hepatocarcinogenesis, we examined levels of
mRNA for
DNA methyltransferases and methyl-CpG-
binding proteins and the DNA methylation status in 67
hepatocellular carcinomas (HCCs). The average level of
mRNA for DNMT1 and DNMT3a was significantly higher in noncancerous liver tissues showing
chronic hepatitis or
cirrhosis than in histologically normal liver tissues, and was even higher in HCCs. Significant overexpression of DNMT3b and reduced expression of DNMT2 were observed in HCCs compared with the corresponding noncancerous liver tissues.
DNA hypermethylation on CpG islands of the p16 (8% and 66%) and hMLH1 (0% and 0%) genes and methylated in
tumor (MINT) 1 (6% and 34%), 2 (24% and 58%), 12 (21% and 33%), 25 (0% and 5%), and 31 (0% and 23%) clones, and
DNA hypomethylation on satellites 2 and 3 (18% and 67%), were detected in noncancerous liver tissues and HCCs, respectively. There was no significant correlation between the expression level of any
DNA methyltransferase and DNA methylation status. Reduced expression of DNA repair
protein, MBD4, was significantly correlated with poorer
tumor differentiation and involvement of portal vein. Slightly reduced expression of MBD2 was detected in HCCs, and the expression of MeCP2 was particularly reduced in HCCs with portal vein involvement. These data suggest that overexpression of DNMT1 and DNMT3a,
DNA hypermethylation on CpG islands, and
DNA hypomethylation on pericentromeric satellite regions are early events during hepatocarcinogenesis, and that reduced expression of MBD4 may play a role in malignant progression of HCC.