Abstract | BACKGROUND: OBJECTIVE: A GWAS of asthma was performed in a non-Hispanic white population. METHODS: A GWAS was performed in 813 Severe Asthma Research Program/Collaborative Studies on the Genetics of Asthma/Chicago Asthma Genetics Study cases and 1564 control subjects. The GWAS results were compared with those of the published GWASs of autoimmune diseases. RESULTS: Multiple single nucleotide polymorphisms in the TNFAIP3 interacting protein 1 (TNIP1) gene, which interacts with TNFAIP3 and inhibits the TNF-α-induced nuclear factor κB inflammation pathway, were associated with asthma: rs1422673 (P = 3.44 × 10(-7)) and rs10036748 (P = 1.41 × 10(-6), r(2) = 0.67). rs1422673 was also associated with asthma in the published GABRIEL (P = .018) and EVE (P = 1.31 × 10(-5)) studies. The minor allele T of rs20541 in IL13 is the risk allele for asthma but the protective allele for psoriasis. The minor allele T of rs2395185 in HLA-DRA is the risk allele for asthma but the protective allele for ulcerative colitis. The minor allele A of rs2872507 in GSDMB is the protective allele for asthma but the risk allele for rheumatoid arthritis, Crohn disease, and ulcerative colitis. The T allele of rs10036748 in the TNIP1 gene is the minor protective allele for asthma but the minor or major risk allele for systemic lupus erythematosus and systemic sclerosis in non-Hispanic white or Chinese subjects, respectively. CONCLUSIONS: Our study suggests that single nucleotide polymorphisms associated with both asthma and autoimmune diseases might have opposite effects on immunopathogenesis.
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Authors | Xingnan Li, Elizabeth J Ampleford, Timothy D Howard, Wendy C Moore, Dara G Torgerson, Huashi Li, William W Busse, Mario Castro, Serpil C Erzurum, Elliot Israel, Dan L Nicolae, Carole Ober, Sally E Wenzel, Gregory A Hawkins, Eugene R Bleecker, Deborah A Meyers |
Journal | The Journal of allergy and clinical immunology
(J Allergy Clin Immunol)
Vol. 130
Issue 4
Pg. 861-8.e7
(Oct 2012)
ISSN: 1097-6825 [Electronic] United States |
PMID | 22694930
(Publication Type: Journal Article, Research Support, N.I.H., Extramural, Research Support, Non-U.S. Gov't)
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Copyright | Copyright © 2012 American Academy of Allergy, Asthma & Immunology. Published by Mosby, Inc. All rights reserved. |
Chemical References |
- DNA-Binding Proteins
- TNIP1 protein, human
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Topics |
- Asthma
(etiology, genetics, immunology)
- Autoimmune Diseases
(etiology, genetics, immunology)
- DNA-Binding Proteins
(genetics)
- Genome-Wide Association Study
- Humans
- Polymorphism, Single Nucleotide
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