The ongoing
COVID-19 pandemic has highlighted the dearth of approved drugs to treat
viral infections, with only ∼90 FDA approved drugs against human viral pathogens. To identify drugs that can block SARS-CoV-2 replication, extensive drug screening to repurpose approved drugs is underway. Here, we screened ∼18,000 drugs for
antiviral activity using live
virus infection in human respiratory cells. Dose-response studies validate 122 drugs with
antiviral activity and selectivity against SARS-CoV-2. Amongst these drug candidates are 16
nucleoside analogs, the largest category of clinically used
antivirals. This included the
antiviral Remdesivir approved for use in
COVID-19, and the
nucleoside Molnupirivir, which is undergoing clinical trials. RNA viruses rely on a high supply of
nucleoside triphosphates from the host to efficiently replicate, and we identified a panel of host
nucleoside biosynthesis inhibitors as
antiviral, and we found that combining
pyrimidine biosynthesis inhibitors with
antiviral nucleoside analogs synergistically inhibits
SARS-CoV-2 infection in vitro and in vivo suggesting a clinical path forward.