Tumor suppressor genes are frequently silenced in
cancer cells by
enzymes catalyzing epigenetic histone modifications. The
peptidylarginine deiminase family member PAD4 (also called PADI4) is markedly overexpressed in a majority of human
cancers, suggesting that PAD4 is a putative target for
cancer treatment. Here, we have generated novel PAD inhibitors with low micromolar IC(50) in PAD activity and
cancer cell growth inhibition. The lead compound
YW3-56 alters the expression of genes controlling the cell cycle and cell death, including SESN2 that encodes an upstream inhibitor of the
mammalian target of rapamycin complex 1 (
mTORC1) signaling pathway. Guided by the gene expression profile analyses with
YW3-56, we found that PAD4 functions as a
corepressor of p53 to regulate SESN2 expression by
histone citrullination in
cancer cells. Consistent with the
mTORC1 inhibition by SESN2, the phosphorylation of its substrates including p70S6
kinase (
p70S6K) and 4E-BP1 was decreased. Furthermore, macroautophagy is perturbed after
YW3-56 treatment in
cancer cells. In a mouse xenograft model,
YW3-56 demonstrates
cancer growth inhibition activity with little if any detectable adverse effect to vital organs, whereas a combination of PAD4 and
histone deacetylase inhibitors further decreases
tumor growth. Taken together, our work found that PAD4 regulates the
mTORC1 signaling pathway and that PAD inhibitors are potential anticancer
reagents that activate tumor suppressor gene expression alone or in combination with
histone deacetylase inhibitors.