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Genomic-based high throughput screening identifies small molecules that differentially inhibit the antiviral and immunomodulatory effects of IFN-alpha.

Abstract
Multiple lines of evidence suggest that inhibition of Type I Interferons, including IFN-alpha, may provide a therapeutic benefit for autoimmune diseases. Using a chemical genomics approach integrated with cellular and in vivo assays, we screened a small compound library to identify modulators of IFN-alpha biological effects. A genomic fingerprint was developed from both ex vivo patient genomic information and in vitro gene modulation from IFN-alpha cell-based stimulation. A high throughput genomic-based screen then was applied to prioritize 268 small molecule inhibitors targeting 41 different intracellular signaling pathways. Active compounds were profiled further for their ability to inhibit the activation and differentiation of human monocytes using disease-related stimuli. Inhibitors targeting NF-kappaB or Janus Kinase/Signal Transducer and Activator of Transcription (JAK/STAT) signaling emerged as "dissociated inhibitors" because they did not modulate IFN-alpha anti-viral effects against HSV-1 but potently inhibited other immune-related functions. This work describes a novel strategy to identify small molecule inhibitors for the treatment of autoimmune disorders.
AuthorsBo Chen, Qin Zong, Ricardo Cibotti, Chad Morris, Juana Castaneda, Brian Naiman, Derong Liu, Anna Glodek, Gary P Sims, Ronald Herbst, Stephen K Horrigan, Peter A Kiener, Dan Soppet, Anthony J Coyle, Laurent Audoly
JournalMolecular medicine (Cambridge, Mass.) (Mol Med) 2008 Jul-Aug Vol. 14 Issue 7-8 Pg. 374-82 ISSN: 1076-1551 [Print] England
PMID18475307 (Publication Type: Journal Article, Validation Study)
Chemical References
  • Antiviral Agents
  • Immunologic Factors
  • Interferon-alpha
  • Small Molecule Libraries
Topics
  • Animals
  • Antiviral Agents (antagonists & inhibitors)
  • Cells, Cultured
  • Down-Regulation (drug effects, genetics, immunology)
  • Female
  • Gene Expression Profiling (methods)
  • Genome, Human
  • Genomics (instrumentation, methods)
  • Humans
  • Immunologic Factors (antagonists & inhibitors)
  • Interferon-alpha (antagonists & inhibitors)
  • Mice
  • Mice, Inbred Strains
  • Models, Biological
  • Oligonucleotide Array Sequence Analysis (methods)
  • Signal Transduction (drug effects, genetics, immunology)
  • Small Molecule Libraries (analysis, pharmacology)

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