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Defective DNA ligation during short-patch single-strand break repair in ataxia oculomotor apraxia 1.

Abstract
Ataxia oculomotor apraxia 1 (AOA1) results from mutations in aprataxin, a component of DNA strand break repair that removes AMP from 5' termini. Despite this, global rates of chromosomal strand break repair are normal in a variety of AOA1 and other aprataxin-defective cells. Here we show that short-patch single-strand break repair (SSBR) in AOA1 cell extracts bypasses the point of aprataxin action at oxidative breaks and stalls at the final step of DNA ligation, resulting in the accumulation of adenylated DNA nicks. Strikingly, this defect results from insufficient levels of nonadenylated DNA ligase, and short-patch SSBR can be restored in AOA1 extracts, independently of aprataxin, by the addition of recombinant DNA ligase. Since adenylated nicks are substrates for long-patch SSBR, we reasoned that this pathway might in part explain the apparent absence of a chromosomal SSBR defect in aprataxin-defective cells. Indeed, whereas chemical inhibition of long-patch repair did not affect SSBR rates in wild-type mouse neural astrocytes, it uncovered a significant defect in Aptx(-/-) neural astrocytes. These data demonstrate that aprataxin participates in chromosomal SSBR in vivo and suggest that short-patch SSBR arrests in AOA1 because of insufficient nonadenylated DNA ligase.
AuthorsJohn J Reynolds, Sherif F El-Khamisy, Sachin Katyal, Paula Clements, Peter J McKinnon, Keith W Caldecott
JournalMolecular and cellular biology (Mol Cell Biol) Vol. 29 Issue 5 Pg. 1354-62 (Mar 2009) ISSN: 1098-5549 [Electronic] United States
PMID19103743 (Publication Type: Journal Article, Research Support, Non-U.S. Gov't)
Chemical References
  • APTX protein, human
  • DNA-Binding Proteins
  • Nuclear Proteins
  • Recombinant Proteins
  • DNA Ligases
Topics
  • Animals
  • Astrocytes (metabolism)
  • Cells, Cultured
  • DNA Ligases (deficiency)
  • DNA Repair
  • DNA-Binding Proteins (physiology)
  • Humans
  • Mice
  • Mice, Knockout
  • Nuclear Proteins (physiology)
  • Recombinant Proteins (pharmacology)
  • Spinocerebellar Ataxias (genetics)

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