Werner Syndrome is a
premature aging disorder characterized by
chromosomal instability. Recently we reported a novel interaction of the WRN gene product with human 5'
flap endonuclease/
5'-3' exonuclease (FEN-1),
a DNA structure-specific nuclease implicated in pathways of
DNA metabolism that are important for
genomic stability. To characterize the mechanism for WRN stimulation of
FEN-1 cleavage, we have determined the effect of WRN on the kinetic parameters of the
FEN-1 cleavage reaction. WRN enhanced the efficiency of
FEN-1 cleavage rather than
DNA substrate binding. WRN effectively stimulated
FEN-1 cleavage on a flap
DNA substrate with
streptavidin bound to the terminal 3'
nucleotide at the end of the upstream duplex, indicating that WRN does not require a free upstream end to stimulate
FEN-1 cleavage of the 5' flap substrate. These results indicate that the mechanism whereby WRN stimulates
FEN-1 cleavage is distinct from that proposed for the functional interaction between
proliferating cell nuclear antigen and
FEN-1. To understand the potential importance of the WRN-FEN-1(1) interaction in DNA replication, we have tested the effect of WRN on
FEN-1 cleavage of several
DNA substrate intermediates that may arise during Okazaki fragment processing. WRN stimulated
FEN-1 cleavage of flap substrates with a terminal monoribonucleotide, a long 5' ssDNA tract, and a pseudo-Y structure. The ability of WRN to facilitate
FEN-1 cleavage of DNA replication/repair intermediates may be important for the role of WRN in the maintenance of
genomic stability.