Melanoma accounts for the majority of
skin cancer deaths. About 50% of all
melanomas are associated with BRAF mutations. BRAF mutations are classified into three classes with regard to dependency on RAF dimerization and RAS signaling. The most frequently occurring class I BRAF V600 mutations are sensitive to
vemurafenib whereas class II and class III mutants, non-V600 BRAF mutants are resistant to
vemurafenib. Herein we report six pyrimido[4,5-d]pyrimidin-2-one derivatives possessing highly potent anti-proliferative activities on
melanoma cells harboring BRAF class I/II/III mutants. Novel and most potent derivative, SIJ1777, possesses not only two-digit nanomolar potency but also 2 to 14-fold enhanced anti-proliferative activities compared with reference compound,
GNF-7 against
melanoma cells (SK-MEL-2, SK-MEL-28, A375, WM3670, WM3629). Moreover, SIJ1777 substantially inhibits the activation of
MEK, ERK, and AKT and remarkably induces apoptosis and significantly blocks migration, invasion, and anchorage-independent growth of
melanoma cells harboring BRAF class I/II/II mutations while both
vemurafenib and
PLX8394 have little to no effects on
melanoma cells expressing BRAF class II/III mutations. Taken together, our six
GNF-7 derivatives exhibit highly potent activities against
melanoma cells harboring class I/II/III BRAF mutations compared with
vemurafenib as well as
PLX8394.