Machine Learning Analysis of Matricellular Proteins and Clinical Variables for Early Prediction of Delayed Cerebral Ischemia After Aneurysmal Subarachnoid Hemorrhage.

Abstract

Although delayed cerebral ischemia (DCI) is a well-known complication after subarachnoid hemorrhage (SAH), there are no reliable biomarkers to predict DCI development. Matricellular proteins (MCPs) have been reported relevant to DCI and expected to become biomarkers. As machine learning (ML) enables the classification of various input data and the result prediction, the aim of this study was to construct early prediction models of DCI development with clinical variables and MCPs using ML analyses. Early-stage clinical data of 95 SAH patients in a prospective cohort were analyzed and applied to a ML algorithm, random forest, to construct three prediction models: (1) a model with only clinical variables on admission, (2) a model with only plasma levels of MCP (periostin, osteopontin, and galectin-3) at post-onset days 1-3, and (3) a model with both clinical variables on admission and MCP values at days 1-3. The prediction accuracy of the development of DCI, angiographic vasospasm, or cerebral infarction and the importance of each feature were computed. The prediction accuracy of DCI development was 93.9% in model 1, 87.2% in model 2, and 95.1% in model 3, but that of angiographic vasospasm or cerebral infarction was lower. The three most important features in model 3 for DCI were periostin, osteopontin, and galectin-3, followed by aneurysm location. All of the early-stage prediction models of DCI development constructed by ML worked with high accuracy and sensitivity. One-time early-stage measurement of plasma MCPs served for reliable prediction of DCI development, suggesting their potential utility as biomarkers.

• Authors: Satoru Tanioka, Fujimaro Ishida, Fumi Nakano, Fumihiro Kawakita, Hideki Kanamaru, Yoshinari Nakatsuka, Hirofumi Nishikawa, Hidenori Suzuki, pSEED group
• Journal: Molecular neurobiology (Mol Neurobiol) Vol. 56 Issue 10 Pg. 7128-7135 (Oct 2019) ISSN: 1559-1182 [Electronic] United States
• PMID: 30989629 (Publication Type: Journal Article)

Topics

• Aged
• Algorithms
• Brain Ischemia (diagnosis, etiology, metabolism)
• Female
• Humans
• Intracranial Aneurysm (complications)
• Machine Learning
• Male
• Models, Biological
• Subarachnoid Hemorrhage (complications)