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Multi-targeting of K-Ras domains and mutations by peptide and small molecule inhibitors.

Abstract
K-Ras activating mutations are significantly associated with tumor progression and aggressive metastatic behavior in various human cancers including pancreatic cancer. So far, despite a large number of concerted efforts, targeting of mutant-type K-Ras has not been successful. In this regard, we aimed to target this oncogene by a combinational approach consisting of small peptide and small molecule inhibitors. Based on a comprehensive analysis of structural and physicochemical properties of predominantly K-Ras mutants, an anti-cancer peptide library and a small molecule library were screened to simultaneously target oncogenic mutations and functional domains of mutant-type K-Ras located in the P-loop, switch I, and switch II regions. The selected peptide and small molecule showed notable binding affinities to their corresponding binding sites, and hindered the growth of tumor cells carrying K-RasG12D and K-RasG12C mutations. Of note, the expression of K-Ras downstream genes (i.e., CTNNB1, CCND1) was diminished in the treated Kras-positive cells. In conclusion, our combinational platform signifies a new potential for blockade of oncogenic K-Ras and thereby prevention of tumor progression and metastasis. However, further validations are still required regarding the in vitro and in vivo efficacy and safety of this approach.
AuthorsMansour Poorebrahim, Mohammad Foad Abazari, Leila Moradi, Behzad Shahbazi, Reza Mahmoudi, Hourieh Kalhor, Hassan Askari, Ladan Teimoori-Toolabi
JournalPLoS computational biology (PLoS Comput Biol) Vol. 18 Issue 4 Pg. e1009962 (04 2022) ISSN: 1553-7358 [Electronic] United States
PMID35472201 (Publication Type: Journal Article)
Chemical References
  • Enzyme Inhibitors
  • KRAS protein, human
  • Peptides
  • Small Molecule Libraries
  • Proto-Oncogene Proteins p21(ras)
Topics
  • Enzyme Inhibitors (pharmacology)
  • Genes, ras
  • Humans
  • Mutation
  • Pancreatic Neoplasms (drug therapy, genetics, pathology)
  • Peptides (pharmacology)
  • Proto-Oncogene Proteins p21(ras) (antagonists & inhibitors, genetics)
  • Small Molecule Libraries

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