Structural basis of DDB1-and-Cullin 4-associated Factor 1 (DCAF1) recognition by merlin/NF2 and its implication in tumorigenesis by CD44-mediated inhibition of merlin suppression of DCAF1 function.

Abstract

Merlin, a tumor suppressor encoded by the neurofibromatosis type 2 gene, has been shown to suppress tumorigenesis by inhibiting the Cullin 4-RING E3 ubiquitin ligase CRL4(DCAF) (1) in the nucleus. This inhibition is mediated by direct binding of merlin to DDB1-and-Cullin 4-associated Factor 1 (DCAF1), yet the binding mode of merlin to DCAF1 is not well defined. Here, we report structural and biophysical studies of the merlin binding to DCAF1 and its interference with CD44 binding. The crystal structure of the merlin FERM domain bound to the DCAF1 C-terminal acidic tail reveals that the hydrophobic IILXLN motif located at the C-terminal end of DCAF1 binds subdomain C of the FERM domain by forming a β-strand. The binding site and mode resemble that of merlin binding to the CD44 cytoplasmic tail. Competition binding assay showed that CD44 and DCAF1 compete for binding to the merlin FERM domain in solution. The CD44 cytoplasmic tail is known to be cleaved for nuclear translocation by regulated intra-membrane proteolysis (RIP). Our structure implies that, in the nucleus, the CD44 cytoplasmic tail cleaved by RIP could release DCAF1 from merlin by competing for binding to the merlin FERM domain, which results in the inhibition of merlin-mediated suppression of tumorigenesis.

• Authors: Tomoyuki Mori, Shuhei Gotoh, Maya Shirakawa, Toshio Hakoshima
• Journal: Genes to cells : devoted to molecular & cellular mechanisms (Genes Cells) Vol. 19 Issue 8 Pg. 603-19 (Aug 2014) ISSN: 1365-2443 [Electronic] England
• PMID: 24912773 (Publication Type: Journal Article, Research Support, Non-U.S. Gov't)
• Copyright: © 2014 The Authors Genes to Cells © 2014 by the Molecular Biology Society of Japan and Wiley Publishing Asia Pty Ltd.

Chemical References

• CD44 protein, human
• Carrier Proteins
• Cytoskeletal Proteins
• Hyaluronan Receptors
• Membrane Proteins
• Neurofibromin 2
• radixin
• Ubiquitin-Protein Ligases
• DCAF1 protein, human
• Protein Serine-Threonine Kinases

Topics

• Amino Acid Sequence
• Animals
• Carcinogenesis (metabolism, pathology)
• Carrier Proteins (chemistry, genetics, metabolism)
• Crystallography, X-Ray
• Cytoskeletal Proteins (chemistry, metabolism)
• Humans
• Hyaluronan Receptors (chemistry, metabolism)
• Membrane Proteins (chemistry, metabolism)
• Mice
• Models, Molecular
• Molecular Sequence Data
• Neurofibromin 2 (chemistry, genetics, metabolism)
• Protein Serine-Threonine Kinases
• Protein Structure, Secondary
• Protein Structure, Tertiary
• Ubiquitin-Protein Ligases