A rapid method to study the relationship between IDDM and HLA-DQ beta 57 Asp.

Abstract

We have developed a rapid and simple method to detect the relation between HLA-DQ beta 57 Asp and Chinese IDDM patients. The method involved the selective amplification of a DNA fragment from the HLA-DQ B1 gene by using the mutagenic primers. After PCR, if the HLA-DQ beta 57 was Asp, then there was an artificially created restriction enzyme cutting site. We then can accurately obtain the results by enzyme digestion and electrophoresis. Sixty-nine IDDM patients and 30 nondiabetic control subjects were analyzed using this method. Twenty-two (42%) IDDM patients had non-Asp 57 homozygous, 31/45%) were Asp/non-Asp 57 heterozygous, and 9 (13%) had Asp-57 homozygous. Of the 30 control subjects, the number of cases for these three types were 6 (20%), 18 (60%), and 6 (20%), respectively. The relative risk of homozygous DQ beta 57 non-Asp in our group was 2.9 and the p value was greater than 0.05. Using this kind of approach, we were able to provide a simple, rapid, and non-radioactive method to detect whether the HLA DQ beta 57 was Asp or not.

• Authors: Y W Huang, L S Lee, M C Shih, Y H Pai, Y J Lee, J G Chang
• Journal: Tissue antigens (Tissue Antigens) Vol. 44 Issue 3 Pg. 155-8 (Sep 1994) ISSN: 0001-2815 [Print] England
• PMID: 7839347 (Publication Type: Journal Article)

Chemical References

• Genetic Markers
• HLA-DQ Antigens
• HLA-DQ beta-Chains
• HLA-DQbeta antigen
• DNA Restriction Enzymes

Topics

• Adolescent
• Aged
• Base Sequence
• Child
• DNA Restriction Enzymes
• Diabetes Mellitus, Type 1 (genetics)
• Female
• Genetic Markers
• HLA-DQ Antigens (genetics)
• HLA-DQ beta-Chains
• Humans
• Male
• Middle Aged
• Molecular Sequence Data
• Polymerase Chain Reaction (methods)