To investigate the contribution of
ion channels to ciliogenesis, we carried out a
small interfering RNA (
siRNA)-based reverse genetics screen of all
ion channels in the mouse genome in murine inner medullary collecting duct kidney cells. This screen revealed four candidate
ion channel genes: Kcnq1, Kcnj10, Kcnf1 and Clcn4. We show that these four
ion channels localize to renal tubules, specifically to the base of primary cilia. We report that human KCNQ1
Long QT syndrome disease alleles regulate renal ciliogenesis; KCNQ1-p.R518X, -p.A178T and -p.K362R could not rescue ciliogenesis after Kcnq1-siRNA-mediated depletion in contrast to wild-type KCNQ1 and benign KCNQ1-p.R518Q, suggesting that the
ion channel function of KCNQ1 regulates ciliogenesis. In contrast, we demonstrate that the
ion channel function of KCNJ10 is independent of its effect on ciliogenesis. Our data suggest that these four
ion channels regulate renal ciliogenesis through the periciliary diffusion barrier or the ciliary pocket, with potential implication as genetic contributors to
ciliopathy pathophysiology. The new functional roles of a subset of
ion channels provide new insights into the disease pathogenesis of
channelopathies, which might suggest future therapeutic approaches.