Abstract | OBJECTIVE: METHODS: We investigated PB cell samples from 74 SSc patients, 21 healthy controls, and 17 SLE patients using Illumina Human Ref-8 BeadChips and quantitative polymerase chain reaction confirmation. None of the study participants were receiving immunosuppressive agents other than low-dose steroids and hydroxychloroquine. In addition to conventional statistical and modular analysis, a composite score for the interferon (IFN)-inducible genes was calculated. Within the group of patients with SSc, the correlation of the IFN score with the serologic and clinical subtypes was investigated, as were single-nucleotide polymorphisms in a selected number of IFN pathway genes. RESULTS: Many of the most prominently overexpressed genes in SSc and SLE were IFN-inducible genes. Forty-three of 47 overexpressed IFN-inducible genes in SSc (91%) were similarly altered in SLE. The IFN score was highest in the SLE patients, followed by the SSc patients, and then the controls. The difference in IFN score among all 3 groups was statistically significant (P < 0.001 for all 3 comparisons). SSc and SLE PB cell samples showed striking parallels to our previously reported SSc skin transcripts in regard to the IFN-inducible gene expression pattern. In SSc, the presence of antitopoisomerase and anti-U1 RNP antibodies and lymphopenia correlated with the higher IFN scores (P = 0.005, P = 0.001, and P = 0.004, respectively); a missense mutation in IFNAR2 was significantly associated with the IFN score. CONCLUSION: SLE and SSc fit within the same spectrum of IFN-mediated diseases. A subset of SSc patients shows a "lupus-like" high IFN-inducible gene expression pattern that correlates with the presence of antitopoisomerase and anti-U1 RNP antibodies.
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Authors | Shervin Assassi, Maureen D Mayes, Frank C Arnett, Pravitt Gourh, Sandeep K Agarwal, Terry A McNearney, Damien Chaussabel, Nancy Oommen, Michael Fischbach, Kairav R Shah, Julio Charles, Virginia Pascual, John D Reveille, Filemon K Tan |
Journal | Arthritis and rheumatism
(Arthritis Rheum)
Vol. 62
Issue 2
Pg. 589-98
(Feb 2010)
ISSN: 0004-3591 [Print] United States |
PMID | 20112391
(Publication Type: Journal Article, Research Support, N.I.H., Extramural)
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Chemical References |
- Autoantibodies
- IFNAR2 protein, human
- Ribonucleoprotein, U1 Small Nuclear
- Receptor, Interferon alpha-beta
- Interferons
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Topics |
- Adult
- Aged
- Autoantibodies
(blood)
- Female
- Gene Expression Profiling
- Genetic Variation
- Humans
- Interferons
(genetics, immunology)
- Leukocytes
(physiology)
- Lupus Erythematosus, Systemic
(genetics, immunology)
- Male
- Middle Aged
- Oligonucleotide Array Sequence Analysis
- Polymorphism, Single Nucleotide
- Quantitative Trait, Heritable
- Receptor, Interferon alpha-beta
(genetics)
- Ribonucleoprotein, U1 Small Nuclear
(genetics)
- Scleroderma, Systemic
(genetics, immunology)
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