Molecular cloning of a novel putative Ca2+ channel protein (TRPC7) highly expressed in brain.

Abstract

We have isolated cDNA clones for a novel human protein, TRPC7 (transient receptor potential-related channels), which consists of 1503 amino acid residues from the fetal brain and caudate nucleus cDNA libraries. Northern blot analysis indicated that the TRPC7 gene is highly expressed as a 6.5-kb transcript in brain. The TRPC7 protein has significant homology with Caenorhabditis elegans hypothetical proteins T01H8.5, C05C12.3, and F54D1.5 and with Drosophila and human transient receptor potential (trp) proteins. The TRPC7 protein has seven putative transmembrane domains that probably constitute a Ca2+ channel as in the above-mentioned proteins. Genomic sequencing revealed that the TRPC7 gene consists of 32 exons spanning approximately 90 kb. The TRPC7 gene was mapped between D21S400 and D21S171 on human chromosome 21q22.3, 14 kb distal to a NotI site in D21S400. This novel TRPC7 gene could be a candidate gene for genetic disorders such as bipolar affective disorder, nonsyndromic hereditary deafness, Knobloch syndrome, and holoprosencephaly, which were mapped to this region.

• Authors: K Nagamine, J Kudoh, S Minoshima, K Kawasaki, S Asakawa, F Ito, N Shimizu
• Journal: Genomics (Genomics) Vol. 54 Issue 1 Pg. 124-31 (Nov 15 1998) ISSN: 0888-7543 [Print] United States
• PMID: 9806837 (Publication Type: Journal Article, Research Support, Non-U.S. Gov't)
• Copyright: Copyright 1998 Academic Press.

Chemical References

• Calcium Channels
• DNA, Complementary
• Ion Channels
• Membrane Proteins
• TRPC Cation Channels
• TRPC7 protein, human
• TRPM Cation Channels
• TRPM2 protein, human

Topics

• Amino Acid Sequence
• Base Sequence
• Blotting, Northern
• Brain (embryology, metabolism)
• Calcium Channels (chemistry, genetics, metabolism)
• Chromosome Mapping
• Chromosomes, Human, Pair 21 (genetics)
• Cloning, Molecular
• DNA, Complementary
• Exons
• Humans
• Introns
• Ion Channels
• Membrane Proteins
• Molecular Sequence Data
• Organ Specificity
• Phylogeny
• Sequence Alignment
• TRPC Cation Channels
• TRPM Cation Channels