Sequence analysis, identification of evolutionary conserved motifs and expression analysis of murine tcof1 provide further evidence for a potential function for the gene and its human homologue, TCOF1.

Abstract

The gene mutated in Treacher Collins syndrome, an autosomal dominant disorder of facial development, has recently been cloned. While the function of the predicted protein, Treacle, is unknown, it has been shown to share a number of features with the highly phosphorylated nucleolar phosphoproteins, which play a role in nucleolar-cytoplasmic transport. In the current study, the murine homologue of the Treacher Collins syndrome gene has been isolated and shown to encode a low complexity, serine/alanine-rich protein of 133 kDa. Interspecies comparison indicates that the proteins display 61.5% identity, with the level of conservation being greatest in the regions of acidic/basic amino acid repeats and nuclear localization signals. These features are shared with the nucleolar phosphoproteins. Confirmation that the gene isolated in the current study is orthologous with the Treacher Collins syndrome gene was provided by the demonstration that it mapped to central mouse chromosome 18 in a conserved syntenic region with human chromosome 5q21-q33. Expression analysis in the mouse indicated that the gene was expressed in a wide variety of embryonic and adult tissues. Peak levels of expression in the developing embryo were observed at the edges of the neural folds immediately prior to fusion, and also in the developing branchial arches at the times of critical morphogenetic events. These observations support a role for the gene in the development of the craniofacial complex and provide further evidence that the gene encodes a protein which may be involved in nucleolar-cytoplasmic transport.

• Authors: J Dixon, K Hovanes, R Shiang, M J Dixon
• Journal: Human molecular genetics (Hum Mol Genet) Vol. 6 Issue 5 Pg. 727-37 (May 1997) ISSN: 0964-6906 [Print] England
• PMID: 9158147 (Publication Type: Journal Article, Research Support, Non-U.S. Gov't, Research Support, U.S. Gov't, P.H.S.)

Chemical References

• Intracellular Signaling Peptides and Proteins
• Nuclear Proteins
• Phosphoproteins
• TCOF1 protein, human
• Tcof1 protein, mouse

Topics

• Amino Acid Sequence
• Animals
• Base Sequence
• Cattle
• Chromosome Mapping
• Conserved Sequence
• Dogs
• Embryo, Mammalian (metabolism)
• Evolution, Molecular
• Gene Expression Regulation, Developmental
• Haplorhini (genetics)
• Humans
• In Situ Hybridization (methods)
• Intracellular Signaling Peptides and Proteins
• Mice
• Mice, Inbred C57BL
• Mice, Inbred ICR
• Molecular Sequence Data
• Nuclear Proteins (genetics, metabolism)
• Phosphoproteins (genetics, metabolism)
• Sequence Analysis, DNA
• Sequence Homology, Amino Acid
• Sheep (genetics)
• Swine (genetics)