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Fusion protein gene nucleotide sequence similarities, shared antigenic sites and phylogenetic analysis suggest that phocid distemper virus type 2 and canine distemper virus belong to the same virus entity.

Abstract
Nucleotide sequencing of the fusion protein (F) gene of phocid distemper virus-2 (PDV-2), recently isolated from Baikal seals (Phoca sibirica), revealed an open reading frame (nucleotides 84 to 2075) with two potential in-frame ATG translation initiation codons. We suggest that the second in-frame ATG triplet at positions 264 to 266 initiates the translation, resulting in a protein of 537 amino acid residues with a calculated M(r) of 63,035. The putative F1/F2 cleavage site, located approximately 100 amino acid residues from the N terminus, is identical to those of the F proteins of phocid distemper virus-1 (PDV-1) isolated from European harbour seals (Phoca vitulina) and of canine distemper virus (CDV). A full scale comparison of morbillivirus F genes reveals that the conserved F0 extracellular protein-encoding region contains a large number of non-expressed mutations, suggesting that this part of the protein is under strong functional constraints. Phylogenetic analysis of morbillivirus F gene nucleotide sequences revealed a closer evolutionary relationship between PDV-2 and CDV than between PDV-1 and PDV-2. These data were supported by cross-reactivity patterns of PDV-2 and CDV obtained with monoclonal antibodies to structural proteins of PDV-1 and CDV, and suggest that PDV-2 is a strain of CDV, resulting from a trans-species infection.
AuthorsI K Visser, R W van der Heijden, M W van de Bildt, M J Kenter, C Orvell, A D Osterhaus
JournalThe Journal of general virology (J Gen Virol) Vol. 74 ( Pt 9) Pg. 1989-94 (Sep 1993) ISSN: 0022-1317 [Print] England
PMID8376973 (Publication Type: Journal Article)
Chemical References
  • Codon
  • DNA, Viral
  • RNA, Messenger
  • Viral Fusion Proteins
  • F protein, Phocine distemper virus
Topics
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Codon (genetics)
  • DNA, Viral (genetics)
  • Distemper Virus, Canine (genetics)
  • Genes, Viral
  • Measles virus (genetics)
  • Molecular Sequence Data
  • Molecular Weight
  • Paramyxoviridae (genetics, isolation & purification)
  • Phylogeny
  • RNA, Messenger (genetics)
  • Seals, Earless
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid
  • Viral Fusion Proteins (biosynthesis, genetics, isolation & purification)

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