Abstract |
To determine whether the expression of histone modification enzymes is regulated in physiological and pathological conditions, we took an experimental database mining approach pioneered in our labs to determine a panoramic expression profile of 164 enzymes in 19 human and 17 murine tissues. We have made the following significant findings: (1) Histone enzymes are differentially expressed in cardiovascular, immune, and other tissues; (2) our new pyramid model showed that heart and T cells are among a few tissues in which histone acetylation/deacetylation, and histone methylation/demethylation are in the highest varieties; and (3) histone enzymes are more downregulated than upregulated in metabolic diseases and regulatory T cell (Treg) polarization/ differentiation, but not in tumors. These results have demonstrated a new working model of " Sand out and Gold stays," where more downregulation than upregulation of histone enzymes in metabolic diseases makes a few upregulated enzymes the potential novel therapeutic targets in metabolic diseases and Treg activity.
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Authors | Ying Shao, Valeria Chernaya, Candice Johnson, William Y Yang, Ramon Cueto, Xiaojin Sha, Yi Zhang, Xuebin Qin, Jianxin Sun, Eric T Choi, Hong Wang, Xiao-feng Yang |
Journal | Journal of cardiovascular translational research
(J Cardiovasc Transl Res)
Vol. 9
Issue 1
Pg. 49-66
(Feb 2016)
ISSN: 1937-5395 [Electronic] United States |
PMID | 26746407
(Publication Type: Comparative Study, Journal Article, Research Support, N.I.H., Extramural)
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Chemical References |
- Enzymes
- Histones
- RNA, Messenger
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Topics |
- Acetylation
- Animals
- Data Mining
- Databases, Genetic
- Enzymes
(genetics, metabolism)
- Gene Expression Profiling
(methods)
- Gene Expression Regulation, Enzymologic
- Histone Code
- Histones
(metabolism)
- Humans
- Metabolic Diseases
(enzymology, genetics)
- Methylation
- Mice
- Oligonucleotide Array Sequence Analysis
- RNA, Messenger
(genetics, metabolism)
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