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Analogues and derivatives of oncrasin-1, a novel inhibitor of the C-terminal domain of RNA polymerase II and their antitumor activities.

Abstract
To optimize the antitumor activity of oncrasin-1, a small molecule RNA polymerase II inhibitor, we evaluated 69 oncrasin-1 analogues for their cytotoxic activity against normal human epithelial cells and K-Ras mutant tumor cells. About 40 of those compounds were as potent as or more potent than oncrasin-1 in tumor cells and had a minimal cytotoxic effect on normal cells. Structure-activity relationship analysis revealed that most of the active compounds contained either a hydroxymethyl group or an aldehyde group as a substitute at the 3-position of the indole. Both electron-donating and electron-withdrawing groups in the benzene ring were well tolerated. The hydroxymethyl compounds ranged from equipotent with to 100 times as potent as the corresponding aldehyde compounds. We tested three active analogues' effect on RNA polymerase phosphorylation and found that they all inhibited phosphorylation of the C-terminal domain of RNA polymerase II, suggesting that the active compounds might act through the same mechanisms as oncrasin-1.
AuthorsShuhong Wu, Li Wang, Wei Guo, Xiaoying Liu, Jinsong Liu, Xiaoli Wei, Bingliang Fang
JournalJournal of medicinal chemistry (J Med Chem) Vol. 54 Issue 8 Pg. 2668-79 (Apr 28 2011) ISSN: 1520-4804 [Electronic] United States
PMID21443218 (Publication Type: Journal Article, Research Support, N.I.H., Extramural, Research Support, Non-U.S. Gov't)
Chemical References
  • Antineoplastic Agents
  • Enzyme Inhibitors
  • Indoles
  • oncrasin-1
  • RNA Polymerase II
Topics
  • Antineoplastic Agents (chemistry, pharmacology)
  • Cell Line, Tumor
  • Chromatography, High Pressure Liquid
  • Enzyme Inhibitors (chemistry, pharmacology)
  • Humans
  • Indoles (chemistry, pharmacology)
  • Inhibitory Concentration 50
  • Magnetic Resonance Spectroscopy
  • Mass Spectrometry
  • RNA Polymerase II (antagonists & inhibitors, metabolism)
  • Spectrophotometry, Ultraviolet
  • Structure-Activity Relationship

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