Hypermutation induced by APOBEC-1 overexpression can be eliminated.

Abstract

APOBEC-1 overexpression in liver has been shown to effectively reduce apoB-100 levels. However, nonspecific hypermutation and liver tumor formation potentially related to hypermutation in transgenic animals compromise its potential use for gene therapy. In studying apoB mRNA editing regulation, we found that the core editing auxiliary factor ACF dose-dependently increases APOBEC-1 nonspecific hypermutation and specific editing with variable site sensitivity. Overexpression of APOBEC-1 together with ACF in human hepatic HepG2 cells hypermutated apoB mRNAs 20%-65% at sites 6639, 6648, 6655, 6762, 6802, and 6845, in addition to the normal 90% editing at 6666. The hypermutation activity of APOBEC-1 was decreased to background levels by a single point APOBEC-1 mutation of P29F or E181Q, while 50% of wild-type control editing at the normal site was retained. The hypermutations on both apoB and novel APOBEC-1 target 1 (NAT1) mRNA were also decreased to background levels with P29F and E181Q mutants in rat liver primary culture cells. The loss of hypermutation with the mutants was associated with significantly decreased APOBEC-1/ACF interaction. These data suggest that nonspecific hypermutation induced by overexpressing APOBEC-1 can be virtually eliminated by site-specific mutation, while maintaining specific editing activity at the normal site, reopening the potential use of APOBEC-1 gene therapy for hyperlipidemia.

• Authors: Zhigang Chen, Thomas L Eggerman, Alexander V Bocharov, Irina N Baranova, Tatyana G Vishnyakova, Gyorgy Csako, Amy P Patterson
• Journal: RNA (New York, N.Y.) (RNA) Vol. 16 Issue 5 Pg. 1040-52 (May 2010) ISSN: 1469-9001 [Electronic] United States
• PMID: 20348446 (Publication Type: Journal Article, Research Support, N.I.H., Extramural, Research Support, N.I.H., Intramural)

Chemical References

• A1CF protein, human
• Apolipoproteins B
• DNA Primers
• Isoenzymes
• RNA, Messenger
• RNA-Binding Proteins
• Recombinant Proteins
• Arylamine N-Acetyltransferase
• N-acetyltransferase 1
• APOBEC-1 Deaminase
• APOBEC1 protein, human
• Apobec1 protein, rat
• Cytidine Deaminase

Topics

• APOBEC-1 Deaminase
• Amino Acid Substitution
• Animals
• Apolipoproteins B (genetics)
• Arylamine N-Acetyltransferase (chemistry, genetics, metabolism)
• Base Sequence
• Cell Line
• Cells, Cultured
• Cytidine Deaminase (chemistry, genetics, metabolism)
• DNA Primers (genetics)
• Gene Expression
• Hepatocytes (metabolism)
• Humans
• Isoenzymes (chemistry, genetics, metabolism)
• Mutagenesis, Site-Directed
• Mutation
• RNA Editing
• RNA, Messenger (genetics, metabolism)
• RNA-Binding Proteins (genetics, metabolism)
• Rats
• Recombinant Proteins (chemistry, genetics, metabolism)