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Evidence that methylation of hepatitis B virus covalently closed circular DNA in liver tissues of patients with chronic hepatitis B modulates HBV replication.

Abstract
Epigenetic factors may modulate chronic Hepatitis B viral infection by affecting virion gene transcription. The aim of this study was to compare the methylation status of the intrahepatic covalently closed circular DNA (cccDNA) CpG island 2 and HBV replication capability. HBV cccDNA was extracted from liver biopsies of 55 HBsAg-positive patients with chronic hepatitis B (32 HBeAg-positive and 23 HBeAg-negative), and was analyzed for methylation status and quantity. The two Hpa II recognition sequences CCpGG in the CpG island 2 were methylated in infected liver tissues from 24 (43.6%) of 55 patients. Positive ratios of cccDNA methylation were significantly higher in HBeAg-negative patients (15/23, 65.2%) than HBeAg-positive patients (9/32, 28.1%) (P < 0.05). The percentage of methylated-cccDNA/total-cccDNA of HBeAg-negative samples (a median of 48%, ranging from 5% to 83%) was significantly higher (P < 0.001) than HBeAg-positive samples (a median of 14%, ranging from 0.26% to 35%). Ratios of relaxed circular DNA (rcDNA) to cccDNA molecules revealed that cccDNA methylation correlated with impaired virion productivity in HBeAg-positive individuals (P < 0.05). The bisulfite DNA sequencing showed that methylation density was significantly higher in HBeAg-negative than in HBeAg-positive patients (P < 0.05). The methylation level of the CpG island 2 of the cccDNA in HBeAg-negative patients was higher than that in HBeAg-positive patients, suggesting that HBV cccDNA methylation may be relevant to replication capability of HBV.
AuthorsYanhai Guo, Yongnian Li, Shijie Mu, Ju Zhang, Zhen Yan
JournalJournal of medical virology (J Med Virol) Vol. 81 Issue 7 Pg. 1177-83 (Jul 2009) ISSN: 1096-9071 [Electronic] United States
PMID19475606 (Publication Type: Journal Article, Research Support, Non-U.S. Gov't)
CopyrightCopyright 2009 Wiley-Liss, Inc.
Chemical References
  • DNA, Circular
  • DNA, Viral
Topics
  • Adult
  • Aged
  • DNA Methylation
  • DNA, Circular (metabolism)
  • DNA, Viral (metabolism)
  • Female
  • Hepatitis B virus (physiology)
  • Hepatitis B, Chronic (virology)
  • Humans
  • Liver (virology)
  • Male
  • Middle Aged
  • Virus Replication
  • Young Adult

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