The frequent deletion of the human chromosomal region 9p21, including the
methylthioadenosine phosphorylase (MTAP) gene, is hypothesized to lead to the intra- and/or extracellular accumulation of
5'-deoxy-5'-methylthioadenosine (
MTA) in
cancer cells and the subsequent promotion of
tumor progression. The lack of sensitive methodology for the direct measurement of
MTA in
tumor cells has hampered the testing of this hypothesis to date. A liquid chromatography electrospray ionization tandem mass spectrometry method (LC-MS/MS) was developed for the absolute quantitative determination of
MTA in cell
culture media and
cell extracts using stable
isotope labeled
MTA as an internal standard. Limit of detection (LOD) and lower limit of quantification (LLOQ) were 62.5 pM and 2 nM, respectively, and allowed the direct measurement of
MTA in
biological samples without prior enrichment. Average imprecision of
MTA extraction from cells and cell media, as well as LC-MS/MS analysis were 9.7, 3.8 and 1.9%, respectively. The method enabled the demonstration of the accumulation of
MTA in
melanoma cell
culture media reaching a steady-state level within 24h. Only a slight difference in extracellular
MTA concentrations was observed between cells with and without MTAP expression. However, there was a fourfold increase in intracellular
MTA concentration in
melanoma cells lacking MTAP, thus confirming the hypothesized accumulation of
MTA in human
cancer cells harboring a chromosome 9p21 deletion.