A novel full-length gene of human ribosomal protein L14.22 related to human glioma.

Abstract

BACKGROUND:

This study was undertaken to obtain differentially expressed genes related to human glioma by cDNA microarray and the characterization of a novel full-length gene.

METHODS:

Total RNA was extracted form human glioma and normal brain tissue, and mRNA was used as a probe. The results of hybridization procedure were scanned with the computer system. The gene named 507E08 cone was subsequently analyzed by northern blot, bioinformatic approach, and protein expression.

RESULTS:

Fifteen differentially expressed genes were obtained from human glioma by hybridization and scanning for four times. Northern blot analysis confirmed that the 507E08 clone was low expressed in human brain tissue and over expressed in human glioma tissues. The analysis of BLASTn and BLASTx showed that the 507E08 clone was a novel full-length gene, which codes 203 amino acid of protein and is called human ribosomal protein 14.22 gene. The nucleotide sequence had been submitted to the GenBank with the accession number of AF329277. After expression in E. coli., protein yielded a major band of apparent molecular mass 22 kDa on an SDS-PAGE gel.

CONCLUSIONS:

cDNA microarray technology can be successfully used to identify differentially expressed genes. The novel full-length gene of human ribosomal protein 13.22 may be correlated with the development of human glioma.

• Authors: Zhen-yu Qi, Guo-zhen Hui, Yao Li, Zong-xiang Zhou, Shao-hua Gu, Yi Xie
• Journal: Chinese medical journal (Chin Med J (Engl)) Vol. 119 Issue 16 Pg. 1353-8 (Aug 20 2006) ISSN: 0366-6999 [Print] China
• PMID: 16934181 (Publication Type: Journal Article)

Chemical References

• DNA, Complementary
• RNA, Messenger
• Recombinant Proteins
• Ribosomal Proteins
• ribosomal protein 14.22

Topics

• Amino Acid Sequence
• Base Sequence
• Blotting, Northern
• Cloning, Molecular
• DNA, Complementary (chemistry, genetics)
• Electrophoresis, Polyacrylamide Gel
• Escherichia coli (genetics)
• Glioma (genetics, pathology)
• Humans
• Molecular Sequence Data
• Oligonucleotide Array Sequence Analysis
• RNA, Messenger (genetics, metabolism)
• Recombinant Proteins (isolation & purification, metabolism)
• Ribosomal Proteins (genetics, metabolism)
• Sequence Analysis, DNA